Thomas is always open to new perspectives, and I am sure will get along with Logen swimmingly. At least until he starts preaching dogmatic conservatism of intellectual thought, and admits to persecuting and killing people on the orders of a religious group. Thomas is not too keen on that guff, but water under the bridge and all that. Thomas doesn't care about the past except in how it will inform future events, so if you're solid and not-murderous then things will be grand. Who knows, maybe Thomas can win him over to the side of Science and Progress.